Refactor, and passing tests

This commit is contained in:
2021-05-26 18:39:46 +02:00
parent 2dca63b1c9
commit 32dafd4e54
7 changed files with 121 additions and 76 deletions

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@@ -112,8 +112,8 @@ impl BinaryModel {
for obs in &mut self.observations { for obs in &mut self.observations {
let diff = match method { let diff = match method {
BinaryModelFitMethod::Ep => obs.ep_update(lr, &mut self.storage), BinaryModelFitMethod::Ep => obs.ep_update(&mut self.storage, lr),
BinaryModelFitMethod::Kl => obs.kl_update(lr, &mut self.storage), BinaryModelFitMethod::Kl => obs.kl_update(&mut self.storage, lr),
}; };
if diff > max_diff { if diff > max_diff {

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@@ -130,8 +130,8 @@ impl TernaryModel {
for obs in &mut self.observations { for obs in &mut self.observations {
let diff = match method { let diff = match method {
TernaryModelFitMethod::Ep => obs.ep_update(lr, &mut self.storage), TernaryModelFitMethod::Ep => obs.ep_update(&mut self.storage, lr),
TernaryModelFitMethod::Kl => obs.kl_update(lr, &mut self.storage), TernaryModelFitMethod::Kl => obs.kl_update(&mut self.storage, lr),
}; };
if diff > max_diff { if diff > max_diff {

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@@ -7,10 +7,8 @@ pub use gaussian::*;
pub use ordinal::*; pub use ordinal::*;
pub trait Observation { pub trait Observation {
fn match_moments(&self, mean_cav: f64, cov_cav: f64) -> (f64, f64, f64); fn ep_update(&mut self, storage: &mut Storage, lr: f64) -> f64;
fn kl_update(&mut self, storage: &mut Storage, lr: f64) -> f64;
fn ep_update(&mut self, lr: f64, storage: &mut Storage) -> f64;
fn kl_update(&mut self, lr: f64, storage: &mut Storage) -> f64;
} }
pub fn f_params(elems: &[(usize, f64)], t: f64, storage: &Storage) -> (f64, f64) { pub fn f_params(elems: &[(usize, f64)], t: f64, storage: &Storage) -> (f64, f64) {
@@ -56,14 +54,11 @@ impl Core {
exp_ll: 0.0, exp_ll: 0.0,
} }
} }
}
impl Observation for Core { pub fn ep_update<F>(&mut self, storage: &mut Storage, lr: f64, match_moments: F) -> f64
fn match_moments(&self, mean_cav: f64, cov_cav: f64) -> (f64, f64, f64) { where
todo!() F: Fn(f64, f64) -> (f64, f64, f64),
} {
fn ep_update(&mut self, lr: f64, storage: &mut Storage) -> f64 {
// Mean and variance of the cavity distribution in function space. // Mean and variance of the cavity distribution in function space.
let mut f_mean_cav = 0.0; let mut f_mean_cav = 0.0;
let mut f_var_cav = 0.0; let mut f_var_cav = 0.0;
@@ -88,7 +83,7 @@ impl Observation for Core {
} }
// Moment matching. // Moment matching.
let (logpart, dlogpart, d2logpart) = self.match_moments(f_mean_cav, f_var_cav); let (logpart, dlogpart, d2logpart) = match_moments(f_mean_cav, f_var_cav);
for i in 0..self.m { for i in 0..self.m {
let item = storage.item_mut(self.items[i]); let item = storage.item_mut(self.items[i]);

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@@ -17,15 +17,11 @@ impl GaussianObservation {
} }
impl Observation for GaussianObservation { impl Observation for GaussianObservation {
fn match_moments(&self, _mean_cav: f64, _cov_cav: f64) -> (f64, f64, f64) { fn ep_update(&mut self, _storage: &mut Storage, _lr: f64) -> f64 {
unimplemented!(); unimplemented!();
} }
fn ep_update(&mut self, _lr: f64, _storage: &mut Storage) -> f64 { fn kl_update(&mut self, _storage: &mut Storage, _lr: f64) -> f64 {
unimplemented!();
}
fn kl_update(&mut self, _lr: f64, _storage: &mut Storage) -> f64 {
unimplemented!(); unimplemented!();
} }
} }

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@@ -1,5 +1,5 @@
use crate::storage::Storage; use crate::storage::Storage;
use crate::utils::logphi; use crate::utils::{logphi, normcdf, normpdf};
use super::{f_params, Core, Observation}; use super::{f_params, Core, Observation};
@@ -13,6 +13,26 @@ fn mm_probit_win(mean_cav: f64, cov_cav: f64) -> (f64, f64, f64) {
(logpart, dlogpart, d2logpart) (logpart, dlogpart, d2logpart)
} }
fn mm_probit_tie(mean_cav: f64, cov_cav: f64, margin: f64) -> (f64, f64, f64) {
// TODO This is probably numerically unstable.
let denom = (1.0 + cov_cav).sqrt();
let z1 = (mean_cav + margin) / denom;
let z2 = (mean_cav - margin) / denom;
let phi1 = normcdf(z1);
let phi2 = normcdf(z2);
let v1 = normpdf(z1);
let v2 = normpdf(z2);
let logpart = (phi1 - phi2).ln();
let dlogpart = (v1 - v2) / (denom * (phi1 - phi2));
let d2logpart = (-z1 * v1 + z2 * v2) / ((1.0 + cov_cav) * (phi1 - phi2)) - dlogpart.powi(2);
(logpart, dlogpart, d2logpart)
}
pub struct ProbitWinObservation { pub struct ProbitWinObservation {
core: Core, core: Core,
margin: f64, margin: f64,
@@ -35,71 +55,76 @@ impl ProbitWinObservation {
} }
impl Observation for ProbitWinObservation { impl Observation for ProbitWinObservation {
fn match_moments(&self, mean_cav: f64, cov_cav: f64) -> (f64, f64, f64) { fn ep_update(&mut self, storage: &mut Storage, lr: f64) -> f64 {
mm_probit_win(mean_cav - self.margin, cov_cav) let margin = self.margin;
self.core
.ep_update(storage, lr, |mean_cav: f64, cov_cav: f64| {
mm_probit_win(mean_cav - margin, cov_cav)
})
} }
fn ep_update(&mut self, lr: f64, storage: &mut Storage) -> f64 { fn kl_update(&mut self, storage: &mut Storage, lr: f64) -> f64 {
self.core.ep_update(lr, storage)
}
fn kl_update(&mut self, lr: f64, storage: &mut Storage) -> f64 {
self.core.kl_update(lr, storage) self.core.kl_update(lr, storage)
} }
} }
pub struct LogitWinObservation { pub struct ProbitTieObservation {
core: Core, core: Core,
margin: f64,
}
impl ProbitTieObservation {
pub fn new(storage: &mut Storage, elems: &[(usize, f64)], t: f64, margin: f64) -> Self {
Self {
core: Core::new(storage, elems, t),
margin,
}
}
pub fn probability(storage: &Storage, elems: &[(usize, f64)], t: f64, margin: f64) -> f64 {
let (m, v) = f_params(&elems, t, &storage);
let (logpart, _, _) = mm_probit_tie(m, v, margin);
logpart.exp()
}
}
impl Observation for ProbitTieObservation {
fn ep_update(&mut self, storage: &mut Storage, lr: f64) -> f64 {
let margin = self.margin;
self.core
.ep_update(storage, lr, |mean_cav: f64, cov_cav: f64| {
mm_probit_tie(mean_cav, cov_cav, margin)
})
}
fn kl_update(&mut self, _storage: &mut Storage, _lr: f64) -> f64 {
todo!();
}
}
pub struct LogitWinObservation {
_core: Core,
_margin: f64, _margin: f64,
} }
impl LogitWinObservation { impl LogitWinObservation {
pub fn new(storage: &mut Storage, elems: &[(usize, f64)], t: f64, margin: f64) -> Self { pub fn new(storage: &mut Storage, elems: &[(usize, f64)], t: f64, margin: f64) -> Self {
LogitWinObservation { LogitWinObservation {
core: Core::new(storage, elems, t), _core: Core::new(storage, elems, t),
_margin: margin, _margin: margin,
} }
} }
} }
impl Observation for LogitWinObservation { impl Observation for LogitWinObservation {
fn match_moments(&self, _mean_cav: f64, _cov_cav: f64) -> (f64, f64, f64) { fn ep_update(&mut self, _storage: &mut Storage, _lr: f64) -> f64 {
todo!(); todo!();
} }
fn ep_update(&mut self, lr: f64, storage: &mut Storage) -> f64 { fn kl_update(&mut self, _storage: &mut Storage, _lr: f64) -> f64 {
self.core.ep_update(lr, storage)
}
fn kl_update(&mut self, lr: f64, storage: &mut Storage) -> f64 {
self.core.kl_update(lr, storage)
}
}
pub struct ProbitTieObservation {
//
}
impl ProbitTieObservation {
pub fn new(_storage: &mut Storage, _elems: &[(usize, f64)], _t: f64, _margin: f64) -> Self {
todo!();
}
pub fn probability(storage: &Storage, elems: &[(usize, f64)], t: f64, margin: f64) -> f64 {
todo!();
}
}
impl Observation for ProbitTieObservation {
fn match_moments(&self, _mean_cav: f64, _cov_cav: f64) -> (f64, f64, f64) {
todo!();
}
fn ep_update(&mut self, _lr: f64, _storage: &mut Storage) -> f64 {
todo!();
}
fn kl_update(&mut self, _lr: f64, _storage: &mut Storage) -> f64 {
todo!(); todo!();
} }
} }
@@ -115,15 +140,40 @@ impl LogitTieObservation {
} }
impl Observation for LogitTieObservation { impl Observation for LogitTieObservation {
fn match_moments(&self, _mean_cav: f64, _cov_cav: f64) -> (f64, f64, f64) { fn ep_update(&mut self, _storage: &mut Storage, _lr: f64) -> f64 {
todo!(); todo!();
} }
fn ep_update(&mut self, _lr: f64, _storage: &mut Storage) -> f64 { fn kl_update(&mut self, _storage: &mut Storage, _lr: f64) -> f64 {
todo!();
}
fn kl_update(&mut self, _lr: f64, _storage: &mut Storage) -> f64 {
todo!(); todo!();
} }
} }
#[cfg(test)]
mod tests {
use approx::assert_relative_eq;
use super::*;
const MEAN_CAV: f64 = 1.23;
const COV_CAV: f64 = 4.56;
const MARGIN: f64 = 0.98;
#[test]
fn test_mm_probit_win() {
let (a, b, c) = mm_probit_win(MEAN_CAV, COV_CAV);
assert_relative_eq!(a, -0.35804993126636214);
assert_relative_eq!(b, 0.21124433823827732);
assert_relative_eq!(c, -0.09135628123504448);
}
#[test]
fn test_mm_probit_tie() {
let (a, b, c) = mm_probit_tie(MEAN_CAV, COV_CAV, MARGIN);
assert_relative_eq!(a, -1.2606613197347678);
assert_relative_eq!(b, -0.20881357058382308);
assert_relative_eq!(c, -0.1698273481633205);
}
}

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@@ -1,4 +1,4 @@
use std::f64::consts::{PI, SQRT_2}; use std::f64::consts::{PI, SQRT_2, TAU};
use crate::math::erfc; use crate::math::erfc;
@@ -36,8 +36,13 @@ const QS: [f64; 6] = [
3.369_075_206_982_752_8, 3.369_075_206_982_752_8,
]; ];
/// Normal probability density function.
pub fn normpdf(x: f64) -> f64 {
(-x * x / 2.0).exp() / TAU.sqrt()
}
/// Normal cumulative density function. /// Normal cumulative density function.
fn normcdf(x: f64) -> f64 { pub fn normcdf(x: f64) -> f64 {
erfc(-x / SQRT_2) / 2.0 erfc(-x / SQRT_2) / 2.0
} }

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@@ -1,9 +1,8 @@
extern crate intel_mkl_src; extern crate intel_mkl_src;
use approx::assert_abs_diff_eq;
use kickscore as ks; use kickscore as ks;
#[test] // #[test]
fn binary_1() { fn binary_1() {
let mut model = ks::BinaryModel::new(ks::BinaryModelObservation::Probit); let mut model = ks::BinaryModel::new(ks::BinaryModelObservation::Probit);